U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    phol pleiohomeotic like [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39095, updated on 9-Dec-2024

    Summary

    Official Symbol
    pholprovided by FlyBase
    Official Full Name
    pleiohomeotic likeprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035997
    Locus tag
    Dmel_CG3445
    See related
    AllianceGenome:FB:FBgn0035997
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG3445; Dmel\CG3445; Pho1; Phol; PHOL
    Summary
    Enables sequence-specific DNA binding activity. Involved in heterochromatin formation. Located in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See phol in Genome Data Viewer
    Location:
    67B7-67B8; 3-29 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (9452803..9456281, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (9445903..9449381, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ghiberti Neighboring gene antisense RNA:CR45873 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in heterochromatin formation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of PcG protein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in chromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of transcription regulator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    pleiohomeotic like
    Names
    CG3445-PA
    CG3445-PB
    Pleiohomeotic-like
    pho-like
    phol-PA
    phol-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      9452803..9456281 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300076.1NP_001287005.1  pleiohomeotic like, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287005.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VSZ3
      Conserved Domains (4) summary
      COG5048
      Location:504614
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:533553
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:531553
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:575602
      zf-H2C2_2; Zinc-finger double domain
    2. NM_140060.3NP_648317.1  pleiohomeotic like, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648317.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VSZ3
      Related
      FBpp0076203
      Conserved Domains (4) summary
      COG5048
      Location:504614
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:533553
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:531553
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:575602
      zf-H2C2_2; Zinc-finger double domain