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    NPM1 nucleophosmin [ Gallus gallus (chicken) ]

    Gene ID: 396203, updated on 17-Aug-2024

    Summary

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    Symbol
    NPM1provided by CGNC
    Full Name
    nucleophosminprovided by CGNC
    Primary source
    CGNC:49698
    See related
    Ensembl:ENSGALG00010010420
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    NO38
    Orthologs
    human mouse all
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    Genomic context

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    See NPM1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (2910427..2921634, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (2922021..2933226, complement)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101748409 Neighboring gene fibroblast growth factor 18 Neighboring gene RAN binding protein 17 Neighboring gene T cell leukemia homeobox 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The nucleolar phosphoprotein B23 targets Newcastle disease virus matrix protein to the nucleoli and facilitates viral replication. Duan Z, et al. Virology, 2014 Mar. PMID 24606698
    2. [Matrix protein of Newcastle disease virus interacts with avian nucleophosmin B23. 1 in HEK-293T cells]. Duan Z, et al. Wei Sheng Wu Xue Bao, 2013 Jul 4. PMID 24195380
    3. Posttranscriptional regulation of chicken ccn2 gene expression by nucleophosmin/B23 during chondrocyte differentiation. Mukudai Y, et al. Mol Cell Biol, 2008 Oct. PMID 18678650, Free PMC Article
    4. Major nucleolar proteins shuttle between nucleus and cytoplasm. Borer RA, et al. Cell, 1989 Feb 10. PMID 2914325
    5. cDNA sequences of chicken nucleolin/C23 and NO38/B23, two major nucleolar proteins. Maridor G, et al. Nucleic Acids Res, 1990 Mar 11. PMID 2320420, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Phosphoprotein B23 targets Newcastle disease virus matrix protein to the nucleoli and facilitates viral replication.
      Title: The nucleolar phosphoprotein B23 targets Newcastle disease virus matrix protein to the nucleoli and facilitates viral replication.
    2. Matrix protein of Newcastle disease virus interacts with chicken nucleophosmin B23.1.
      Title: [Matrix protein of Newcastle disease virus interacts with avian nucleophosmin B23. 1 in HEK-293T cells].
    3. The present study reveals a novel aspect of NPM/B23 as a key player in the posttranscriptional regulation of ccn2 mRNA during the differentiation of chondrocytes.
      Title: Posttranscriptional regulation of chicken ccn2 gene expression by nucleophosmin/B23 during chondrocyte differentiation.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of centrosome duplication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal large subunit biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal large subunit export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal small subunit biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal small subunit export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nucleophosmin
    Names
    NPM
    nucleolar phosphoprotein B23
    nucleolar protein NO38
    nucleophosmin (nucleolar phosphoprotein B23, numatrin)
    numatrin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205267.2 → NP_990598.2  nucleophosmin

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000256
      UniProtKB/Swiss-Prot
      P16039
      Related
      ENSGALP00010014155.1, ENSGALT00010024922.1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2910427..2921634 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2922021..2933226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P16039.1 GenPept UniProtKB/Swiss-Prot:P16039

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials