U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RHBG Rh family B glycoprotein [ Sus scrofa (pig) ]

    Gene ID: 397056, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RHBGprovided by VGNC
    Official Full Name
    Rh family B glycoproteinprovided by VGNC
    Primary source
    VGNC:VGNC:98845
    See related
    Ensembl:ENSSSCG00000035121
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Biased expression in kidney (RPKM 17.9), liver (RPKM 17.4) and 3 other tissues See more
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RHBG in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 4 NC_010446.5 (93694259..93708055, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 4 NC_010446.4 (102509894..102511016)

    Chromosome 4 - NC_010446.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102167529 Neighboring gene uncharacterized LOC106510131 Neighboring gene microRNA mir-9-1 Neighboring gene TSSK6 activating cochaperone Neighboring gene chaperonin containing TCP1 subunit 3 Neighboring gene transmembrane protein 79 Neighboring gene glycosylated lysosomal membrane protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. New insights into the Rh superfamily of genes and proteins in erythroid cells and nonerythroid tissues. Huang CH, et al. Blood Cells Mol Dis, 2001 Jan-Feb. PMID 11358367
    2. Evolutionary conservation and diversification of Rh family genes and proteins. Huang CH, et al. Proc Natl Acad Sci U S A, 2005 Oct 25. PMID 16227429, Free PMC Article
    3. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
    4. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ammonium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ammonium homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ammonium transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ammonium transporter Rh type B
    Names
    Rh type B glycoprotein
    rh family type B glycoprotein
    rhesus blood group family type B glycoprotein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213996.1 → NP_999161.1  ammonium transporter Rh type B

      See identical proteins and their annotated locations for NP_999161.1

      Status: PROVISIONAL

      Source sequence(s)
      AY013261
      UniProtKB/Swiss-Prot
      Q95M75
      UniProtKB/TrEMBL
      A0A287BLC2, A0A480F489, A0A8D1P679
      Related
      ENSSSCP00000057315.3, ENSSSCT00000037369.3
      Conserved Domains (1) summary
      cl03012
      Location:61 → 406
      Ammonium_transp; Ammonium Transporter Family

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010446.5 Reference Sscrofa11.1 Primary Assembly

      Range
      93694259..93708055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021088695.1 → XP_020944354.1  ammonium transporter Rh type B isoform X2

      UniProtKB/TrEMBL
      A0A287BLC2, A0A8D1P679
      Conserved Domains (1) summary
      cl03012
      Location:1 → 337
      Ammonium_transp; Ammonium Transporter Family

    2. XM_021088694.1 → XP_020944353.1  ammonium transporter Rh type B isoform X1

      UniProtKB/TrEMBL
      A0A287BLC2, A0A8D1P679
      Conserved Domains (1) summary
      cl03012
      Location:61 → 360
      Ammonium_transp; Ammonium Transporter Family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q95M75.1 GenPept UniProtKB/Swiss-Prot:Q95M75

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.