U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Chro Chromator [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40508, updated on 9-Dec-2024

    Summary

    Official Symbol
    Chroprovided by FlyBase
    Official Full Name
    Chromatorprovided by FlyBase
    Primary source
    FLYBASE:FBgn0044324
    Locus tag
    Dmel_CG10712
    See related
    AllianceGenome:FB:FBgn0044324
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:fe2E3; CG10712; Chiz; Chr; Chriz; CHRIZ; Chriz-WR; CHRIZ/CHRO; chro; CHRO; Chro(Chriz); CHRO/CHRIZ; Dmel\CG10712; MRG15
    Summary
    Enables histone binding activity. Involved in several processes, including metaphase chromosome alignment; mitotic spindle assembly checkpoint signaling; and mitotic spindle organization. Located in chromosome; microtubule cytoskeleton; and nucleus. Is expressed in several structures, including adult head; embryonic brain; embryonic/larval midgut; embryonic/larval salivary gland; and energid. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Chro in Genome Data Viewer
    Location:
    80B1-80B2; 3-47 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (22873702..22878984, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (22866802..22872084, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor 1 Neighboring gene antisense RNA:CR45969 Neighboring gene antisense RNA:CR45968 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45970 Neighboring gene Suppressor of stem-loop mutation Neighboring gene slimfast

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    mobile_element

    • Loc: c22875069-22874925 mobile_element_type = transposon:INE-1{}2641

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables histone binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables methylated histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in chromosome organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in chromosome segregation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in heterochromatin formation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in metamorphosis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in metaphase chromosome alignment IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in mitotic spindle assembly checkpoint signaling IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in mitotic spindle organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in centrosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in euchromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in pericentric heterochromatin IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in polytene chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in polytene chromosome interband IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in spindle IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    chromator
    Names
    CG10712-PA
    CG10712-PB
    CG10712-PC
    CG10712-PD
    CG10712-PE
    Chro-PA
    Chro-PB
    Chro-PC
    Chro-PD
    Chro-PE
    anon-fast-evolving-2E3
    chromo domain protein interacting with Z4
    chromobox protein interacting with Z4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      22873702..22878984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300221.1NP_001287150.1  chromator, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287150.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86BS3, Q8T9D1
      Conserved Domains (1) summary
      cd00024
      Location:219273
      CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
    2. NM_168976.2NP_730763.2  chromator, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730763.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86BS3, Q8T9D1
      Conserved Domains (1) summary
      cd00024
      Location:219273
      CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
    3. NM_168975.2NP_730762.2  chromator, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730762.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86BS3, Q8T9D1
      Conserved Domains (1) summary
      cd00024
      Location:219273
      CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
    4. NM_001275297.1NP_001262226.1  chromator, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262226.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86BS3, Q8T9D1
      Conserved Domains (1) summary
      cd00024
      Location:219273
      CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
    5. NM_141169.3NP_649426.3  chromator, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649426.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86BS3, Q8T9D1
      Related
      FBpp0078221
      Conserved Domains (1) summary
      cd00024
      Location:219273
      CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...