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    casB type I-E CRISPR-associated protein Cse2/CasB [ Streptomyces avermitilis MA-4680 = NBRC 14893 ]

    Gene ID: 41544606, updated on 16-Jul-2024

    Summary

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    Gene symbol
    casB
    Gene description
    type I-E CRISPR-associated protein Cse2/CasB
    Locus tag
    SAVERM_RS38710
    Gene type
    protein coding
    Organism
    Streptomyces avermitilis MA-4680 = NBRC 14893 (strain: MA-4680, type-material: type strain of Streptomyces avermitilis)
    Lineage
    Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces
    Also known as
    cse2
    Old locus tag
    SAV_7541; SAVERM_7541
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    Genomic context

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    Sequence:
    NC_003155.5 (8987744..8988430, complement)

    NC_003155.5Genomic Context describing neighboring genes Neighboring gene type I-E CRISPR-associated protein Cas6/Cse3/CasE Neighboring gene type I-E CRISPR-associated protein Cas5/CasD Neighboring gene type I-E CRISPR-associated protein Cas7/Cse4/CasC Neighboring gene type I-E CRISPR-associated protein Cse1/CasA Neighboring gene CRISPR-associated endonuclease Cas3''

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003155.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Small CRISPR RNAs guide antiviral defense in prokaryotes. Brouns SJ, et al. Science, 2008 Aug 15. PMID 18703739, Free PMC Article
    2. A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes. Haft DH, et al. PLoS Comput Biol, 2005 Nov. PMID 16292354, Free PMC Article
    3. Genome mining of the Streptomyces avermitilis genome and development of genome-minimized hosts for heterologous expression of biosynthetic gene clusters. Ikeda H, et al. J Ind Microbiol Biotechnol, 2014 Feb. PMID 23990133
    4. Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites. Omura S, et al. Proc Natl Acad Sci U S A, 2001 Oct 9. PMID 11572948, Free PMC Article
    5. Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis. Ikeda H, et al. Nat Biotechnol, 2003 May. PMID 12692562

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type I-E CRISPR-associated protein Cse2/CasB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003155.5 Reference assembly

      Range
      8987744..8988430 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_010988936.1 MULTISPECIES: type I-E CRISPR-associated protein Cse2/CasB [Streptomyces]

      See identical proteins and their annotated locations for WP_010988936.1

      UniProtKB/TrEMBL
      A0A4D4N7T0, A0A6I5EMP6, Q825B7
    Nucleotide Protein
    Heading Accession and Version