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    NPTX2 neuronal pentraxin 2 [ Gallus gallus (chicken) ]

    Gene ID: 416438, updated on 17-Aug-2024

    Summary

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    Symbol
    NPTX2provided by CGNC
    Full Name
    neuronal pentraxin 2provided by CGNC
    Primary source
    CGNC:2600
    See related
    Ensembl:ENSGALG00010022059
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NPTX2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (1194465..1247215)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (1193134..1319660)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene tectonin beta-propeller repeat containing 1 Neighboring gene BAI1 associated protein 2 like 1 Neighboring gene brain protein I3 Neighboring gene translation initiation factor IF-2-like Neighboring gene transmembrane protein 130 Neighboring gene transformation/transcription domain associated protein Neighboring gene uncharacterized LOC121106796 Neighboring gene uncharacterized LOC101748693

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    neuronal pentraxin-2
    Names
    neuronal pentraxin II

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1194465..1247215
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_414750.8 → XP_414750.3  neuronal pentraxin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZG73
      Related
      ENSGALP00010032311.1, ENSGALT00010053636.1
      Conserved Domains (2) summary
      smart00159
      Location:222 → 427
      PTX; Pentraxin / C-reactive protein / pentaxin family
      COG1196
      Location:60 → 216
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1193134..1319660
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040683879.2 → XP_040539813.1  neuronal pentraxin-2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZG73
      Conserved Domains (2) summary
      COG1196
      Location:60 → 216
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cl22861
      Location:222 → 359
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    2. XM_040683878.2 → XP_040539812.1  neuronal pentraxin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZG73
      Conserved Domains (2) summary
      smart00159
      Location:222 → 427
      PTX; Pentraxin / C-reactive protein / pentaxin family
      COG1196
      Location:60 → 216
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein Strain
    Heading Accession and Version

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