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    GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 [ Gallus gallus (chicken) ]

    Gene ID: 416577, updated on 17-Aug-2024

    Summary

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    Symbol
    GGA2provided by CGNC
    Full Name
    golgi associated, gamma adaptin ear containing, ARF binding protein 2provided by CGNC
    Primary source
    CGNC:4608
    See related
    Ensembl:ENSGALG00010017246
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See GGA2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (6938247..6947804)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (6934129..6943702)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene ubiquitin family domain containing 1 Neighboring gene glutamyl-tRNA synthetase 2, mitochondrial Neighboring gene component of oligomeric golgi complex 7 Neighboring gene sodium channel epithelial 1 beta subunit Neighboring gene U2 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor-binding protein GGA2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6938247..6947804
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004945270.5 → XP_004945327.1  ADP-ribosylation factor-binding protein GGA2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YZV7, A0A8V0Z1L8
      Related
      ENSGALP00010024325.1, ENSGALT00010041571.1
      Conserved Domains (3) summary
      smart00809
      Location:512 → 626
      Alpha_adaptinC2; Adaptin C-terminal domain
      cd03567
      Location:7 → 144
      VHS_GGA; VHS domain family, GGA subfamily; GGA (Golgi-localized, Gamma-ear-containing, Arf-binding) comprise a subfamily of ubiquitously expressed, monomeric, motif-binding cargo/clathrin adaptor proteins. The VHS domain has a superhelical structure similar to ...
      cd14239
      Location:208 → 296
      GAT_GGA1_GGA2; GAT domain found in ADP-ribosylation factor (Arf)-binding proteins GGA1 and GGA2

    2. XM_414878.7 → XP_414878.2  ADP-ribosylation factor-binding protein GGA2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YZV7
      Related
      ENSGALP00010024324.1, ENSGALT00010041569.1
      Conserved Domains (3) summary
      smart00809
      Location:503 → 617
      Alpha_adaptinC2; Adaptin C-terminal domain
      cd03567
      Location:7 → 144
      VHS_GGA; VHS domain family, GGA subfamily; GGA (Golgi-localized, Gamma-ear-containing, Arf-binding) comprise a subfamily of ubiquitously expressed, monomeric, motif-binding cargo/clathrin adaptor proteins. The VHS domain has a superhelical structure similar to ...
      cd14239
      Location:208 → 296
      GAT_GGA1_GGA2; GAT domain found in ADP-ribosylation factor (Arf)-binding proteins GGA1 and GGA2

    RNA

    1. XR_005839806.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6934129..6943702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040683297.2 → XP_040539231.1  ADP-ribosylation factor-binding protein GGA2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YZV7
      Conserved Domains (3) summary
      smart00809
      Location:512 → 626
      Alpha_adaptinC2; Adaptin C-terminal domain
      cl02544
      Location:7 → 144
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
      cl03906
      Location:219 → 293
      GAT_SF; GAT domain found in eukaryotic GGAs, metazoan Tom1-like proteins, metazoan STAMs, fungal Vps27, and similar proteins

    2. XM_040683298.2 → XP_040539232.1  ADP-ribosylation factor-binding protein GGA2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YZV7
      Conserved Domains (3) summary
      smart00809
      Location:503 → 617
      Alpha_adaptinC2; Adaptin C-terminal domain
      cl02544
      Location:7 → 144
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
      cl03906
      Location:219 → 293
      GAT_SF; GAT domain found in eukaryotic GGAs, metazoan Tom1-like proteins, metazoan STAMs, fungal Vps27, and similar proteins

    RNA

    1. XR_005854058.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials