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    PDPK1 3-phosphoinositide dependent protein kinase 1 [ Gallus gallus (chicken) ]

    Gene ID: 416588, updated on 10-Oct-2024

    Summary

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    Symbol
    PDPK1provided by CGNC
    Full Name
    3-phosphoinositide dependent protein kinase 1provided by CGNC
    Primary source
    CGNC:50287
    See related
    Ensembl:ENSGALG00010020316
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PDPK1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (7351335..7382398)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (7346992..7378035)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene interleukin 21 receptor Neighboring gene interleukin 9 receptor Neighboring gene potassium channel tetramerization domain containing 5 Neighboring gene ubiquitin conjugating enzyme E2 I

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    3-phosphoinositide-dependent protein kinase 1
    NP_001012547.1
    XP_040503316.1
    XP_040503317.1
    XP_040503320.1
    XP_040503321.1
    XP_040503322.1
    XP_040503324.1
    XP_040503325.1
    XP_046756599.1
    XP_046756600.1
    XP_046756601.1
    XP_046756602.1
    XP_046783390.1
    XP_046783391.1
    XP_046783392.1
    XP_046783393.1
    XP_046783394.1
    XP_046783395.1
    XP_046783396.1
    XP_046783397.1
    XP_046783398.1
    XP_046783399.1
    XP_046783400.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001012529.2 → NP_001012547.1  3-phosphoinositide-dependent protein kinase 1

      See identical proteins and their annotated locations for NP_001012547.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000257
      UniProtKB/TrEMBL
      A0A8V0ZDR4, Q5F3U4
      Conserved Domains (3) summary
      smart00220
      Location:85 → 345
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd01262
      Location:444 → 550
      PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
      cd05581
      Location:83 → 345
      STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7351335..7382398
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040647382.1 → XP_040503316.1  3-phosphoinositide-dependent protein kinase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZDR4
      Related
      ENSGALP00010028994.1, ENSGALT00010049042.1
      Conserved Domains (2) summary
      cd01262
      Location:518 → 624
      PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
      cd05581
      Location:157 → 419
      STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

    2. XM_040647390.2 → XP_040503324.1  3-phosphoinositide-dependent protein kinase 1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZDR4
      Conserved Domains (1) summary
      cd05581
      Location:157 → 419
      STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

    3. XM_040647388.2 → XP_040503322.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6, A0A8V0ZDR4
      Related
      ENSGALP00010028984.1, ENSGALT00010049030.1
      Conserved Domains (2) summary
      cd01262
      Location:417 → 523
      PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
      cd05581
      Location:56 → 318
      STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

    4. XM_046900646.1 → XP_046756602.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    5. XM_046900644.1 → XP_046756600.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    6. XM_046900643.1 → XP_046756599.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    7. XM_040647387.2 → XP_040503321.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6, A0A8V0ZDR4
      Conserved Domains (2) summary
      cd01262
      Location:417 → 523
      PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
      cd05581
      Location:56 → 318
      STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

    8. XM_040647386.2 → XP_040503320.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6, A0A8V0ZDR4
      Conserved Domains (2) summary
      cd01262
      Location:417 → 523
      PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
      cd05581
      Location:56 → 318
      STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

    9. XM_046900645.1 → XP_046756601.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    10. XM_040647391.2 → XP_040503325.1  3-phosphoinositide-dependent protein kinase 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZDR4
      Conserved Domains (1) summary
      cd05581
      Location:83 → 345
      STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

    11. XM_040647383.1 → XP_040503317.1  3-phosphoinositide-dependent protein kinase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZDR4, A0A8V0ZK64, A0A8V0ZK69
      Related
      ENSGALP00010028989.1, ENSGALT00010049035.1
      Conserved Domains (2) summary
      cd01262
      Location:445 → 551
      PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
      cd05581
      Location:84 → 346
      STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7346992..7378035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046927434.1 → XP_046783390.1  3-phosphoinositide-dependent protein kinase 1 isoform X1

    2. XM_046927443.1 → XP_046783399.1  3-phosphoinositide-dependent protein kinase 1 isoform X4

    3. XM_046927441.1 → XP_046783397.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    4. XM_046927442.1 → XP_046783398.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    5. XM_046927438.1 → XP_046783394.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    6. XM_046927436.1 → XP_046783392.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    7. XM_046927439.1 → XP_046783395.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    8. XM_046927437.1 → XP_046783393.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    9. XM_046927440.1 → XP_046783396.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PJA6

    10. XM_046927444.1 → XP_046783400.1  3-phosphoinositide-dependent protein kinase 1 isoform X5

    11. XM_046927435.1 → XP_046783391.1  3-phosphoinositide-dependent protein kinase 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZK64
    Nucleotide Protein Strain
    Heading Accession and Version

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