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    DUS1L dihydrouridine synthase 1 like [ Gallus gallus (chicken) ]

    Gene ID: 417381, updated on 17-Aug-2024

    Summary

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    Symbol
    DUS1Lprovided by CGNC
    Full Name
    dihydrouridine synthase 1 likeprovided by CGNC
    Primary source
    CGNC:66278
    See related
    Ensembl:ENSGALG00010029160
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See DUS1L in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (5575058..5586416)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (5178660..5190071)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 57 Neighboring gene uncharacterized LOC107054748 Neighboring gene fatty acid synthase Neighboring gene G protein pathway suppressor 1 Neighboring gene RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA dihydrouridine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
    Names
    PP3111 protein
    XP_001232803.3
    XP_004946208.2
    XP_040542241.1
    XP_040542242.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5575058..5586416
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004946151.5 → XP_004946208.2  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X1

      UniProtKB/TrEMBL
      A0A8V1AID9
      Related
      ENSGALP00010043153.1, ENSGALT00010070462.1
      Conserved Domains (2) summary
      TIGR01623
      Location:408 → 443
      put_zinc_LRP1; putative zinc finger domain, LRP1 type
      cd02801
      Location:19 → 255
      DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...

    2. XM_001232802.7 → XP_001232803.3  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X2

      Conserved Domains (2) summary
      TIGR01623
      Location:403 → 438
      put_zinc_LRP1; putative zinc finger domain, LRP1 type
      cd02801
      Location:19 → 250
      DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5178660..5190071
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040686307.2 → XP_040542241.1  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X1

      Conserved Domains (2) summary
      cd02801
      Location:19 → 255
      DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
      pfam05142
      Location:409 → 443
      DUF702; Domain of unknown function (DUF702)

    2. XM_040686308.2 → XP_040542242.1  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X2

      Conserved Domains (2) summary
      cd02801
      Location:19 → 250
      DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
      pfam05142
      Location:404 → 438
      DUF702; Domain of unknown function (DUF702)
    Nucleotide Protein Strain
    Heading Accession and Version

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