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    NT5C3B 5'-nucleotidase, cytosolic IIIB [ Gallus gallus (chicken) ]

    Gene ID: 420034, updated on 17-Aug-2024

    Summary

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    Symbol
    NT5C3Bprovided by CGNC
    Full Name
    5'-nucleotidase, cytosolic IIIBprovided by CGNC
    Primary source
    CGNC:2665
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    NT5C3L
    Orthologs
    human mouse all
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    Genomic context

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    See NT5C3B in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (4684124..4688902, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (5846338..5851100, complement)

    Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene prolyl 3-hydroxylase family member 4 (inactive) Neighboring gene FK506 binding protein 10 Neighboring gene kelch like family member 10 Neighboring gene kelch like family member 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-nucleotidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    7-methylguanosine phosphate-specific 5'-nucleotidase
    Names
    5'-nucleotidase, cytosolic III-like
    7-methylguanosine nucleotidase
    N(7)-methylguanylate 5'-phosphatase
    cN-III-like protein
    cytosolic 5'-nucleotidase 3B
    cytosolic 5'-nucleotidase III-like protein
    NP_001006334.1
    NP_001384331.1
    XP_046760308.1
    XP_046789321.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006334.2 → NP_001006334.1  7-methylguanosine phosphate-specific 5'-nucleotidase

      See identical proteins and their annotated locations for NP_001006334.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000365
      UniProtKB/Swiss-Prot
      Q5ZKF6
      Conserved Domains (1) summary
      pfam05822
      Location:41 → 286
      UMPH-1; Pyrimidine 5'-nucleotidase (UMPH-1)

    2. NM_001397402.1 → NP_001384331.1  7-methylguanosine phosphate-specific 5'-nucleotidase

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000365
      UniProtKB/Swiss-Prot
      Q5ZKF6
      Conserved Domains (1) summary
      pfam05822
      Location:41 → 286
      UMPH-1; Pyrimidine 5'-nucleotidase (UMPH-1)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4684124..4688902 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046904352.1 → XP_046760308.1  7-methylguanosine phosphate-specific 5'-nucleotidase isoform X1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5846338..5851100 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046933365.1 → XP_046789321.1  7-methylguanosine phosphate-specific 5'-nucleotidase isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZKF6.1 GenPept UniProtKB/Swiss-Prot:Q5ZKF6

    Gene LinkOut

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