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    CSRNP1 cysteine and serine rich nuclear protein 1 [ Gallus gallus (chicken) ]

    Gene ID: 420425, updated on 17-Aug-2024

    Summary

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    Symbol
    CSRNP1provided by CGNC
    Full Name
    cysteine and serine rich nuclear protein 1provided by CGNC
    Primary source
    CGNC:4517
    See related
    Ensembl:ENSGALG00010026696
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    AXUD1
    Orthologs
    human mouse all
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    Genomic context

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    See CSRNP1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (5250036..5263504)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (5252675..5266175)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109558 Neighboring gene xin actin binding repeat containing 1 Neighboring gene uncharacterized LOC101749395 Neighboring gene golgi reassembly stacking protein 1 Neighboring gene WD repeat domain 48

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A regulatory sub-circuit downstream of Wnt signaling controls developmental transitions in neural crest formation. Azambuja AP, et al. PLoS Genet, 2021 Jan. PMID 33465092, Free PMC Article
    2. Axud1 Integrates Wnt Signaling and Transcriptional Inputs to Drive Neural Crest Formation. Simões-Costa M, et al. Dev Cell, 2015 Sep 14. PMID 26256212, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A regulatory sub-circuit downstream of Wnt signaling controls developmental transitions in neural crest formation.
      Title: A regulatory sub-circuit downstream of Wnt signaling controls developmental transitions in neural crest formation.
    2. Axud1 integrates Wnt signaling with transcriptional inputs to endow the neural crest with its unique molecular signature
      Title: Axud1 Integrates Wnt Signaling and Transcriptional Inputs to Drive Neural Crest Formation.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine/serine-rich nuclear protein 1
    Names
    AXIN1 up-regulated 1
    CSRNP1, Axud1
    cysteine-serine-rich nuclear protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5250036..5263504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040695854.2 → XP_040551788.1  cysteine/serine-rich nuclear protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A6A8
      Conserved Domains (1) summary
      pfam16019
      Location:69 → 286
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    2. XM_418530.8 → XP_418530.3  cysteine/serine-rich nuclear protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A6A8
      Related
      ENSGALP00010039619.1, ENSGALT00010064783.1
      Conserved Domains (1) summary
      pfam16019
      Location:69 → 286
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    3. XM_004939122.5 → XP_004939179.1  cysteine/serine-rich nuclear protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A6A8, A0A8V1A8R7
      Related
      ENSGALP00010039621.1, ENSGALT00010064787.1
      Conserved Domains (1) summary
      pfam16019
      Location:81 → 298
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5252675..5266175
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040664378.2 → XP_040520312.1  cysteine/serine-rich nuclear protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A6A8
      Conserved Domains (1) summary
      pfam16019
      Location:69 → 286
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    2. XM_040664377.2 → XP_040520311.1  cysteine/serine-rich nuclear protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A6A8
      Conserved Domains (1) summary
      pfam16019
      Location:69 → 286
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    3. XM_040664376.2 → XP_040520310.1  cysteine/serine-rich nuclear protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A6A8, A0A8V1A8R7
      Conserved Domains (1) summary
      pfam16019
      Location:81 → 298
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus
    Nucleotide Protein Strain
    Heading Accession and Version

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