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    CCNI cyclin I [ Gallus gallus (chicken) ]

    Gene ID: 422634, updated on 17-Aug-2024

    Summary

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    Symbol
    CCNIprovided by CGNC
    Full Name
    cyclin Iprovided by CGNC
    Primary source
    CGNC:8708
    See related
    Ensembl:ENSGALG00010002678
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CCNI in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (49135937..49161369)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (49141281..49166711)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene membrane bound O-acyltransferase domain containing 4 Neighboring gene liver ribonuclease A Neighboring gene uncharacterized LOC112532354 Neighboring gene septin 11 Neighboring gene sosondowah ankyrin repeat domain family member B Neighboring gene galectin 1B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of genes encoding matrilin-3 and cyclin-I during the impairment and recovery of chicken growth plate in tibial dyschondroplasia. Shahzad M, et al. Avian Dis, 2014 Sep. PMID 25518444
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Expression of Matrilin-3 and Cyclin-I were diminished with parallel decrease in proteins during tibial dyschondroplasia.
      Title: Expression of genes encoding matrilin-3 and cyclin-I during the impairment and recovery of chicken growth plate in tibial dyschondroplasia.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitotic cell cycle phase transition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cyclin-dependent protein kinase holoenzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclin-I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      49135937..49161369
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015276438.4 → XP_015131924.1  cyclin-I isoform X1

      UniProtKB/TrEMBL
      F1P1K0
      Conserved Domains (2) summary
      cd20526
      Location:46 → 144
      CYCLIN_CCNI-like; cyclin box found in cyclin-I (CCNI) and similar proteins
      cl40454
      Location:148 → 220
      CYCLIN_SF; Cyclin box fold superfamily

    2. XM_420590.8 → XP_420590.1  cyclin-I isoform X1

      See identical proteins and their annotated locations for XP_420590.1

      UniProtKB/TrEMBL
      F1P1K0
      Related
      ENSGALP00010003857.1, ENSGALT00010006204.1
      Conserved Domains (2) summary
      cd20526
      Location:46 → 144
      CYCLIN_CCNI-like; cyclin box found in cyclin-I (CCNI) and similar proteins
      cl40454
      Location:148 → 220
      CYCLIN_SF; Cyclin box fold superfamily

    3. XM_040699720.2 → XP_040555654.1  cyclin-I isoform X2

      Conserved Domains (1) summary
      cl40454
      Location:48 → 171
      CYCLIN_SF; Cyclin box fold superfamily

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      49141281..49166711
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040670826.2 → XP_040526760.1  cyclin-I isoform X1

      UniProtKB/TrEMBL
      F1P1K0
      Conserved Domains (2) summary
      cd20526
      Location:46 → 144
      CYCLIN_CCNI-like; cyclin box found in cyclin-I (CCNI) and similar proteins
      cl40454
      Location:148 → 220
      CYCLIN_SF; Cyclin box fold superfamily

    2. XM_040670825.2 → XP_040526759.1  cyclin-I isoform X1

      UniProtKB/TrEMBL
      F1P1K0
      Conserved Domains (2) summary
      cd20526
      Location:46 → 144
      CYCLIN_CCNI-like; cyclin box found in cyclin-I (CCNI) and similar proteins
      cl40454
      Location:148 → 220
      CYCLIN_SF; Cyclin box fold superfamily

    3. XM_040670827.2 → XP_040526761.1  cyclin-I isoform X2

      Conserved Domains (1) summary
      cl40454
      Location:48 → 171
      CYCLIN_SF; Cyclin box fold superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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