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    LRRC27 leucine rich repeat containing 27 [ Gallus gallus (chicken) ]

    Gene ID: 426464, updated on 17-Aug-2024

    Summary

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    Symbol
    LRRC27provided by CGNC
    Full Name
    leucine rich repeat containing 27provided by CGNC
    Primary source
    CGNC:10613
    See related
    Ensembl:ENSGALG00010023118
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    LRDD; PIDD; PIDD1
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC27 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (15383316..15398460)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (15353518..15368672)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene EF-hand calcium binding domain 4B Neighboring gene patatin like phospholipase domain containing 2 Neighboring gene small nucleolar RNA SNORA52 Neighboring gene ribosomal protein lateral stalk subunit P2 Neighboring gene solute carrier family 25 member 22 Neighboring gene microRNA 1663 Neighboring gene uncharacterized LOC121113257 Neighboring gene interferon regulatory factor 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    p53-induced death domain-containing protein 1
    Names
    leucine-rich repeats and death domain containing
    p53-induced death domain protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      15383316..15398460
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004941462.5 → XP_004941519.4  p53-induced death domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8V0ZUI1
      Related
      ENSGALP00010034113.1, ENSGALT00010056345.1
      Conserved Domains (5) summary
      COG4886
      Location:101 → 265
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd08779
      Location:780 → 865
      Death_PIDD; Death Domain of p53-induced protein with a death domain
      sd00033
      Location:85 → 119
      LRR_RI; leucine-rich repeat [structural motif]
      cl02517
      Location:316 → 411
      ZU5; ZU5 domain
      cl39061
      Location:603 → 659
      OTCace; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      15353518..15368672
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040673099.2 → XP_040529033.1  p53-induced death domain-containing protein 1

      Conserved Domains (5) summary
      COG4886
      Location:101 → 265
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd08779
      Location:780 → 865
      Death_PIDD; Death Domain of p53-induced protein with a death domain
      sd00033
      Location:60 → 84
      LRR_RI; leucine-rich repeat [structural motif]
      cl02517
      Location:316 → 411
      ZU5; ZU5 domain
      cl39061
      Location:603 → 659
      OTCace; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
    Nucleotide Protein Strain
    Heading Accession and Version

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