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    CG13838 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42719, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG13838provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039041
    Locus tag
    Dmel_CG13838
    See related
    AllianceGenome:FB:FBgn0039041
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13838
    Orthologs
    all
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    Genomic context

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    See CG13838 in Genome Data Viewer
    Location:
    94D10-94D10; 3-77 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23042241..23042669)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (18867963..18868391)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44226 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Seipin regulates lipid homeostasis by ensuring calcium-dependent mitochondrial metabolism. Ding L, et al. EMBO J, 2018 Sep 3. PMID 30049710, Free PMC Article
    2. Combinatorial binding leads to diverse regulatory responses: Lmd is a tissue-specific modulator of Mef2 activity. Cunha PM, et al. PLoS Genet, 2010 Jul 1. PMID 20617173, Free PMC Article
    3. Wake-up-call, a lin-52 paralogue, and Always early, a lin-9 homologue physically interact, but have opposing functions in regulating testis-specific gene expression. Doggett K, et al. Dev Biol, 2011 Jul 15. PMID 21570388, Free PMC Article
    4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13838-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      23042241..23042669
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142855.2 → NP_651112.1  uncharacterized protein Dmel_CG13838 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651112.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VCS1
      Related
      FBpp0083737
      Conserved Domains (1) summary
      pfam03670
      Location:39 → 73
      UPF0184; uncharacterized protein family (UPF0184)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VCS1 Q9VCS1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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