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    RNFT2 ring finger protein, transmembrane 2 [ Gallus gallus (chicken) ]

    Gene ID: 427723, updated on 17-Aug-2024

    Summary

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    Symbol
    RNFT2provided by CGNC
    Full Name
    ring finger protein, transmembrane 2provided by CGNC
    Primary source
    CGNC:6227
    See related
    Ensembl:ENSGALG00010000475
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    TMEM118
    Orthologs
    human mouse all
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    Genomic context

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    See RNFT2 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (11412978..11440850, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (11424883..11452758, complement)

    Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene F-box and WD repeat domain containing 8 Neighboring gene uncharacterized LOC107054677 Neighboring gene uncharacterized LOC124417236 Neighboring gene C12orf49 homolog Neighboring gene uncharacterized LOC124417212

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of ERAD pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING finger and transmembrane domain-containing protein 2
    Names
    transmembrane protein 118

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      11412978..11440850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040648240.2 → XP_040504174.1  RING finger and transmembrane domain-containing protein 2 isoform X1

      Conserved Domains (1) summary
      cl17238
      Location:386 → 404
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    2. XM_425298.8 → XP_425298.5  RING finger and transmembrane domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0X5D8, A0A8V0X7U3
      Related
      ENSGALP00010000526.1, ENSGALT00010000990.1
      Conserved Domains (1) summary
      cd16742
      Location:386 → 426
      RING-HC_RNFT2; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 2(RNFT2)

    3. XM_025155602.3 → XP_025011370.2  RING finger and transmembrane domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0X5D8

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      11424883..11452758 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040685213.2 → XP_040541147.1  RING finger and transmembrane domain-containing protein 2 isoform X1

      Conserved Domains (1) summary
      cl17238
      Location:386 → 404
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    2. XM_040685214.2 → XP_040541148.1  RING finger and transmembrane domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0X5D8
      Conserved Domains (1) summary
      cd16742
      Location:386 → 426
      RING-HC_RNFT2; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 2(RNFT2)

    3. XM_040685215.2 → XP_040541149.1  RING finger and transmembrane domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0X5D8
    Nucleotide Protein Strain
    Heading Accession and Version

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