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    TB927.1.3180 40S ribosomal protein S11, putative [ Trypanosoma brucei brucei TREU927 ]

    Gene ID: 4357387, updated on 29-Oct-2024

    Summary

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    Gene symbol
    TB927.1.3180
    Gene description
    40S ribosomal protein S11, putative
    Locus tag
    TB927.1.3180
    Gene type
    protein coding
    RNA name
    40S ribosomal protein S11, putative
    RefSeq status
    PROVISIONAL
    Organism
    Trypanosoma brucei brucei TREU927 (isolate: 927/4 GUTat10.1, sub-species: brucei)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma
    Old locus tag
    Tb927.1.3180
    Orthologs
    all
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    Genomic context

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    See TB927.1.3180 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_008409.1 (688963..689487)

    Chromosome 1 - NC_008409.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein, unlikely Neighboring gene hypothetical protein Neighboring gene hypothetical protein, unlikely Neighboring gene phosphatase-like protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_008409.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The DNA sequence of chromosome I of an African trypanosome: gene content, chromosome organisation, recombination and polymorphism. Hall N, et al. Nucleic Acids Res, 2003 Aug 15. PMID 12907729, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S11, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_008409.1 Reference assembly

      Range
      688963..689487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001219015.1 → XP_001219016.1  40S ribosomal protein S11, putative [Trypanosoma brucei brucei TREU927]

      See identical proteins and their annotated locations for XP_001219016.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3L6LDW9, C9ZIN6, Q4GYQ5
      Conserved Domains (1) summary
      PTZ00241
      Location:15 → 174
      PTZ00241; 40S ribosomal protein S11; Provisional
    Nucleotide Protein
    Heading Accession and Version

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