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    pcyt2.L phosphate cytidylyltransferase 2, ethanolamine L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 444649, updated on 9-Dec-2024

    Summary

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    Official Symbol
    pcyt2.L
    Official Full Name
    phosphate cytidylyltransferase 2, ethanolamine L homeolog
    Primary source
    Xenbase:XB-GENE-978341
    Locus tag
    XELAEV_18043746mg
    See related
    EnsemblRapid:ENSXLAG00005033508 AllianceGenome:Xenbase:XB-GENE-978341
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    pcyt2
    Summary
    Predicted to enable ethanolamine-phosphate cytidylyltransferase activity. Predicted to act upstream of or within phosphatidylethanolamine biosynthetic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 82. Orthologous to human PCYT2 (phosphate cytidylyltransferase 2, ethanolamine). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See pcyt2.L in Genome Data Viewer
    Location:
    chromosome: 9_10L
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (28548324..28563498)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (23475314..23490628)

    Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene pyrroline-5-carboxylate reductase family, member 1 L homeolog Neighboring gene sirtuin 7 L homeolog Neighboring gene neuropeptide B L homeolog Neighboring gene anaphase promoting complex subunit 11 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC84177

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ethanolamine-phosphate cytidylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleotidyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphatidylethanolamine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phospholipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    phosphate cytidylyltransferase 2, ethanolamine L homeolog
    NP_001086220.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001092751.1 → NP_001086220.1  phosphate cytidylyltransferase 2, ethanolamine L homeolog

      See identical proteins and their annotated locations for NP_001086220.1

      Status: PROVISIONAL

      Source sequence(s)
      BC074341
      UniProtKB/TrEMBL
      A0A974BXR2, Q6DKC3
      Related
      ENSXLAP00005100057.1, ENSXLAT00005102009.1
      Conserved Domains (3) summary
      PTZ00308
      Location:17 → 368
      PTZ00308; ethanolamine-phosphate cytidylyltransferase; Provisional
      cd02173
      Location:209 → 360
      ECT; CTP:phosphoethanolamine cytidylyltransferase (ECT)
      cd02174
      Location:18 → 160
      CCT; CTP:phosphocholine cytidylyltransferase

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      28548324..28563498
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials