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    cdkn2b cyclin-dependent kinase inhibitor 2B [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 448767, updated on 4-Jan-2025

    Summary

    Official Symbol
    cdkn2bprovided by Xenbase
    Official Full Name
    cyclin-dependent kinase inhibitor 2Bprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-478746
    See related
    Ensembl:ENSXETG00000005465 AllianceGenome:Xenbase:XB-GENE-478746
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    p15; mts2; tp15; cdk4l; ink4b; p15ink4b
    Summary
    Predicted to enable cyclin-dependent protein serine/threonine kinase inhibitor activity. Predicted to be involved in negative regulation of cell population proliferation and regulation of G1/S transition of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in several diseases, including breast cancer (multiple); carcinoma (multiple); hematologic cancer (multiple); high grade glioma (multiple); and melanoma (multiple). Orthologous to several human genes including CDKN2A (cyclin dependent kinase inhibitor 2A). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
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    Genomic context

    See cdkn2b in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (121217673..121223546, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (108982141..108988014, complement)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene microRNA mir-31a Neighboring gene methylthioadenosine phosphorylase Neighboring gene DMRT like family A1 Neighboring gene ELAV like neuron-specific RNA binding protein 2

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC89547

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein kinase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of cell population proliferation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of G1/S transition of mitotic cell cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    cyclin-dependent kinase 4 inhibitor B
    Names
    cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006919.1NP_001006920.1  cyclin-dependent kinase 4 inhibitor B

      See identical proteins and their annotated locations for NP_001006920.1

      Status: PROVISIONAL

      Source sequence(s)
      BC075575
      UniProtKB/TrEMBL
      F6V535, Q6DIG7
      Related
      ENSXETP00000012023.4, ENSXETT00000012023.5
      Conserved Domains (2) summary
      sd00045
      Location:834
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:896
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      121217673..121223546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)