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    ybgF tol-pal system protein YbgF [ Vibrio antiquarius ]

    Gene ID: 45028108, updated on 6-Jun-2024

    Summary

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    Gene symbol
    ybgF
    Gene description
    tol-pal system protein YbgF
    Locus tag
    VEA_RS11810
    Gene type
    protein coding
    Organism
    Vibrio antiquarius (strain: EX25, type-material: type strain of Vibrio antiquarius)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio diabolicus subgroup
    Old locus tag
    VEA_003911
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_013456.1 (2547719..2548471, complement)

    Chromosome 1 - NC_013456.1Genomic Context describing neighboring genes Neighboring gene DUF350 domain-containing protein Neighboring gene potassium channel family protein Neighboring gene quinolinate synthase NadA Neighboring gene peptidoglycan-associated lipoprotein Pal Neighboring gene Tol-Pal system beta propeller repeat protein TolB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013456.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tol-Pal proteins are critical cell envelope components of Erwinia chrysanthemi affecting cell morphology and virulence. Dubuisson JF, et al. Microbiology (Reading), 2005 Oct. PMID 16207916

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    tol-pal system protein YbgF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013456.1 Reference assembly

      Range
      2547719..2548471 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_006742904.1 MULTISPECIES: tol-pal system protein YbgF [Vibrio]

      See identical proteins and their annotated locations for WP_006742904.1

      UniProtKB/TrEMBL
      A0A2L2K372, A0AAE4M3J4
      Conserved Domains (2) summary
      COG1729
      Location:44 → 250
      YbgF; Periplasmic TolA-binding protein (function unknown) [General function prediction only]
      sd00006
      Location:167 → 200
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version