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    MCAN_RS16830 helix-turn-helix domain-containing protein [ Mycobacterium canettii CIPT 140010059 ]

    Gene ID: 45427172, updated on 11-Dec-2024

    Summary

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    Gene symbol
    MCAN_RS16830
    Gene description
    helix-turn-helix domain-containing protein
    Locus tag
    MCAN_RS16830
    Gene type
    protein coding
    Organism
    Mycobacterium canettii CIPT 140010059 (strain: CIPT 140010059)
    Lineage
    Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
    Old locus tag
    MCAN_31981
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    Genomic context

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    Sequence:
    NC_015848.1 (3607921..3608250)

    NC_015848.1Genomic Context describing neighboring genes Neighboring gene type II toxin-antitoxin system VapC family toxin Neighboring gene type II toxin-antitoxin system Phd/YefM family antitoxin Neighboring gene type II toxin-antitoxin system RelE/ParE family toxin Neighboring gene antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein Neighboring gene RES domain-containing protein Neighboring gene IS3-like element IS987 family transposase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_015848.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif. Ren J, et al. Proteins, 2010 May 15. PMID 20196080
    2. Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis. Supply P, et al. Nat Genet, 2013 Feb. PMID 23291586, Free PMC Article
    3. The genome of Mycobacterium africanum West African 2 reveals a lineage-specific locus and genome erosion common to the M. tuberculosis complex. Bentley SD, et al. PLoS Negl Trop Dis, 2012. PMID 22389744, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    helix-turn-helix domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015848.1 Reference assembly

      Range
      3607921..3608250
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003899955.1 MULTISPECIES: helix-turn-helix domain-containing protein [Mycobacterium]

      See identical proteins and their annotated locations for WP_003899955.1

      UniProtKB/Swiss-Prot
      F2GJP2, I6X6L4, O53333, Q7D5Z3
      UniProtKB/TrEMBL
      A0A0H3M8X5, A0A1R3Y409, A0A9P2HAQ9, A0AAQ0I3X1, A5U7K0, L7N5G8
      Conserved Domains (1) summary
      cl22854
      Location:35 → 99
      HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
    Nucleotide Protein
    Heading Accession and Version

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