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    AFK66_RS20400 sensor domain-containing diguanylate cyclase [ Cronobacter malonaticus LMG 23826 ]

    Gene ID: 45717696, updated on 29-Sep-2023

    Summary

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    Gene symbol
    AFK66_RS20400
    Gene description
    sensor domain-containing diguanylate cyclase
    Locus tag
    AFK66_RS20400
    Gene type
    protein coding
    Organism
    Cronobacter malonaticus LMG 23826 (strain: LMG 23826, culture-collection: LMG:23826, type-material: type strain of Cronobacter malonaticus)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Cronobacter
    Old locus tag
    AFK66_023570
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    Genomic context

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    Location:
    plasmid: pCMA1

    NZ_CP013941.1Genomic Context describing neighboring genes Neighboring gene TM2 domain-containing protein Neighboring gene DUF4440 domain-containing protein Neighboring gene hypothetical protein Neighboring gene type VI secretion system tube protein Hcp

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP013941.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fully Closed Genome Sequences of Five Type Strains of the Genus Cronobacter and One Cronobacter sakazakii Strain. Moine D, et al. Genome Announc, 2016 Mar 24. PMID 27013041, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    sensor domain-containing diguanylate cyclase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP013941.1 Reference assembly

      Range
      78462..80039
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_032971797.1 sensor domain-containing diguanylate cyclase [Cronobacter malonaticus]

      UniProtKB/TrEMBL
      V5U6C5
      Conserved Domains (3) summary
      cd12914
      Location:63 → 188
      PDC1_DGC_like; first PDC (PhoQ/DcuS/CitA) domain of diguanylate-cyclase and similar domains
      cd12915
      Location:190 → 286
      PDC2_DGC_like; second PDC (PhoQ/DcuS/CitA) domain of diguanylate-cyclase and similar domains
      pfam00990
      Location:343 → 506
      GGDEF; Diguanylate cyclase, GGDEF domain
    Nucleotide Protein
    Heading Accession and Version