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    ACLA_005910 tropomyosin, putative [ Aspergillus clavatus NRRL 1 ]

    Gene ID: 4705700, updated on 31-Oct-2024

    Summary

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    Gene symbol
    ACLA_005910
    Gene description
    tropomyosin, putative
    Locus tag
    ACLA_005910
    See related
    FungiDB:ACLA_005910; VEuPathDB:ACLA_005910
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See ACLA_005910 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_001517102.1Genomic Context describing neighboring genes Neighboring gene cyclopropane-fatty-acyl-phospholipid synthase, putative Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001517102.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actomyosin contractile ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tropomyosin, putative
    XP_001273261.1
    • encoded by transcript ACLA_005910A
      predicted by EVM2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001517102.1 Reference assembly

      Range
      186355..187103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001273260.1 → XP_001273261.1  tropomyosin, putative [Aspergillus clavatus NRRL 1]

      See identical proteins and their annotated locations for XP_001273261.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A1CDA8
      Conserved Domains (1) summary
      pfam12718
      Location:16 → 157
      Tropomyosin_1; Tropomyosin like
    Nucleotide Protein
    Heading Accession and Version

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