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    TVAGG3_0515350 Mediator complex, subunit Med6 family [ Trichomonas vaginalis G3 ]

    Gene ID: 4751883, updated on 17-May-2024

    Summary

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    Gene symbol
    TVAGG3_0515350
    Gene description
    Mediator complex, subunit Med6 family
    Locus tag
    TVAGG3_0515350
    See related
    TrichDB:TVAGG3_0515350; VEuPathDB:TVAGG3_0515350
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
    Lineage
    Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
    Old locus tag
    TVAG_2v0515350
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    Genomic context

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    See TVAGG3_0515350 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_067204.1 (9643826..9644428)

    Chromosome II - NC_067204.1Genomic Context describing neighboring genes Neighboring gene spectrin binding Neighboring gene U4 snRNA binding Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067204.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mediator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Mediator complex, subunit Med6 family
    XP_001307085.1
    • Deepfry function prediction from predicted structure:heterocyclic compound binding protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_067204.1 Reference assembly

      Range
      9643826..9644428
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001307084.1 → XP_001307085.1  Mediator complex, subunit Med6 family [Trichomonas vaginalis G3]

      See identical proteins and their annotated locations for XP_001307085.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A2FLR3
      Conserved Domains (1) summary
      pfam04934
      Location:5 → 128
      Med6; MED6 mediator sub complex component
    Nucleotide Protein
    Heading Accession and Version

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