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    PverR02_RS31175 helix-turn-helix domain-containing protein [ Pseudomonas veronii ]

    Gene ID: 47559614, updated on 11-Dec-2024

    Summary

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    Gene symbol
    PverR02_RS31175
    Gene description
    helix-turn-helix domain-containing protein
    Locus tag
    PverR02_RS31175
    Gene type
    protein coding
    Organism
    Pseudomonas veronii (strain: R02, nat-host: Solanum tuberosum)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PverR02_31055
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    Genomic context

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    NZ_CP018420.1Genomic Context describing neighboring genes Neighboring gene homocysteine S-methyltransferase family protein Neighboring gene ABC transporter substrate-binding protein Neighboring gene amino acid ABC transporter permease Neighboring gene type II toxin-antitoxin system HipA family toxin Neighboring gene autotransporter domain-containing protein Neighboring gene sodium-extruding oxaloacetate decarboxylase subunit alpha

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP018420.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif. Ren J, et al. Proteins, 2010 May 15. PMID 20196080
    2. Long-Chain Alkyl Cyanides: Unprecedented Volatile Compounds Released by Pseudomonas and Micromonospora Bacteria. Montes Vidal D, et al. Angew Chem Int Ed Engl, 2017 Apr 3. PMID 28276609

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    helix-turn-helix domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP018420.1 Reference assembly

      Range
      6772702..6772983 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_017850027.1 MULTISPECIES: helix-turn-helix domain-containing protein [Pseudomonas]

      UniProtKB/TrEMBL
      A0A1D3K6Q7, A0A2N7YGI2, A0A3S0PHW9
      Conserved Domains (1) summary
      cd00093
      Location:27 → 80
      HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
    Nucleotide Protein
    Heading Accession and Version