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    PICST_67022 hypothetical protein [ Scheffersomyces stipitis CBS 6054 ]

    Gene ID: 4837668, updated on 21-Dec-2023

    Summary

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    Gene symbol
    PICST_67022
    Gene description
    hypothetical protein
    Locus tag
    PICST_67022
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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    Genomic context

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    See PICST_67022 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_009042.1 (1775371..1778256)

    Chromosome 2 - NC_009042.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 3-phosphoglycerate dehydrogenase, serine biosynthesis Neighboring gene monocarboxylate permease homolog Neighboring gene Lactose permease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009042.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic spindle organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_001382567.2
    • go_component microtubule associated complex
      go_funtion motor activity; ATP binding

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009042.1 Reference assembly

      Range
      1775371..1778256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001382530.1 → XP_001382567.2  predicted protein [Scheffersomyces stipitis CBS 6054]

      See identical proteins and their annotated locations for XP_001382567.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A3LPQ3
      Conserved Domains (2) summary
      COG1196
      Location:474 → 708
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01369
      Location:52 → 379
      KISc_KHC_KIF5; Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup
    Nucleotide Protein
    Heading Accession and Version

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