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    PICST_30899 putative sulfite sensitivity protein [ Scheffersomyces stipitis CBS 6054 ]

    Gene ID: 4838255, updated on 18-Sep-2024

    Summary

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    Gene symbol
    PICST_30899
    Gene description
    putative sulfite sensitivity protein
    Locus tag
    PICST_30899
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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    Genomic context

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    See PICST_30899 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_009043.1 (1225168..1226484, complement)

    Chromosome 3 - NC_009043.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase II holoenzyme and kornberg s mediator Neighboring gene dolichyl-phosphate-mannose-protein mannosyltransferase Neighboring gene putative malate permease Neighboring gene putative malate permease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009043.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sulfite transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sulfite transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    putative sulfite sensitivity protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009043.1 Reference assembly

      Range
      1225168..1226484 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001383827.1 → XP_001383864.1  putative sulfite sensitivity protein [Scheffersomyces stipitis CBS 6054]

      See identical proteins and their annotated locations for XP_001383864.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A3LS26
      Conserved Domains (1) summary
      cd09318
      Location:56 → 407
      TDT_SSU1; Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes sulfite sensitivity protein (sulfite efflux pump; SSU1)
    Nucleotide Protein
    Heading Accession and Version

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