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    HMI1 ATP-dependent DNA helicase HMI1, mitochondrial precursor [ Scheffersomyces stipitis CBS 6054 ]

    Gene ID: 4852040, updated on 21-Dec-2023

    Summary

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    Gene symbol
    HMI1
    Gene description
    ATP-dependent DNA helicase HMI1, mitochondrial precursor
    Locus tag
    PICST_29314
    Gene type
    protein coding
    RNA name
    ATP-dependent DNA helicase HMI1, mitochondrial precursor
    RefSeq status
    PROVISIONAL
    Organism
    Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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    Genomic context

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    See HMI1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_009068.1 (3474721..3477315)

    Chromosome 1 - NC_009068.1Genomic Context describing neighboring genes Neighboring gene DNA replication factor C Neighboring gene suppressor of actin mutation Neighboring gene regulator of Ty1 Transposition Neighboring gene similar to CSM1 Chromosome segregation in meiosis

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009068.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5' DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in recombinational repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    ATP-dependent DNA helicase HMI1, mitochondrial precursor

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009068.1 Reference assembly

      Range
      3474721..3477315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001386962.1 → XP_001386999.2  ATP-dependent DNA helicase HMI1, mitochondrial precursor [Scheffersomyces stipitis CBS 6054]

      See identical proteins and their annotated locations for XP_001386999.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A3GIE1
      Conserved Domains (3) summary
      COG0210
      Location:81 → 773
      UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
      pfam13538
      Location:699 → 758
      UvrD_C_2; UvrD-like helicase C-terminal domain
      cl21455
      Location:82 → 361
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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