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    LpgJCM5343_RS03005 GH25 family lysozyme [ Lactobacillus paragasseri ]

    Gene ID: 48924613, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LpgJCM5343_RS03005
    Gene description
    GH25 family lysozyme
    Locus tag
    LpgJCM5343_RS03005
    Gene type
    protein coding
    Organism
    Lactobacillus paragasseri (strain: JCM 5343, culture-collection: JCM:5343, type-material: type strain of Lactobacillus paragasseri)
    Lineage
    Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
    Old locus tag
    LpgJCM5343_05920
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    Genomic context

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    NZ_AP018549.1Genomic Context describing neighboring genes Neighboring gene APC family permease Neighboring gene hypoxanthine phosphoribosyltransferase Neighboring gene DEAD/DEAH box helicase Neighboring gene PTS sugar transporter subunit IIC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_AP018549.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fungal GH25 muramidases: New family members with applications in animal nutrition and a crystal structure at 0.78Å resolution. Moroz OV, et al. PLoS One, 2021. PMID 33711051, Free PMC Article
    2. The crystal structure of a family GH25 lysozyme from Bacillus anthracis implies a neighboring-group catalytic mechanism with retention of anomeric configuration. Martinez-Fleites C, et al. Carbohydr Res, 2009 Sep 8. PMID 19595298
    3. Lactobacillus paragasseri sp. nov., a sister taxon of Lactobacillus gasseri, based on whole-genome sequence analyses. Tanizawa Y, et al. Int J Syst Evol Microbiol, 2018 Nov. PMID 30226464

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    GH25 family lysozyme

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP018549.1 Reference assembly

      Range
      634622..635338
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_020806804.1 MULTISPECIES: GH25 family lysozyme [Lactobacillus]

      UniProtKB/TrEMBL
      A0A6P1EL81, A0AAP6C5C1
    Nucleotide Protein
    Heading Accession and Version