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    fam83g.L family with sequence similarity 83 member G L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 494859, updated on 27-Dec-2024

    Summary

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    Official Symbol
    fam83g.L
    Official Full Name
    family with sequence similarity 83 member G L homeolog
    Primary source
    Xenbase:XB-GENE-6255059
    Locus tag
    XELAEV_18045506mg
    See related
    EnsemblRapid:ENSXLAG00005020129 AllianceGenome:Xenbase:XB-GENE-6255059
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    paws1; fam83g
    Summary
    Predicted to be located in cytosol and nucleus. Orthologous to human FAM83G (family with sequence similarity 83 member G). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See fam83g.L in Genome Data Viewer
    Location:
    chromosome: 9_10L
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (119093956..119125620)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (108495640..108527336)

    Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene synaptogyrin-3 Neighboring gene GRB2 related adaptor protein L homeolog Neighboring gene phosphoribosyl pyrophosphate synthetase-associated protein 2 L homeolog Neighboring gene epsin2 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein FAM83G
    Names
    family with sequence similarity 83, member G

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001094683.1 → NP_001088152.1  protein FAM83G

      See identical proteins and their annotated locations for NP_001088152.1

      Status: PROVISIONAL

      Source sequence(s)
      BC083043
      UniProtKB/Swiss-Prot
      Q5XK72
      UniProtKB/TrEMBL
      A0A974C0N1
      Related
      ENSXLAP00005058947.1, ENSXLAT00005060386.1
      Conserved Domains (2) summary
      cd09187
      Location:20 → 291
      PLDc_FAM83G_N; N-terminal phospholipase D-like domain of the uncharacterized protein Family with sequence similarity 83G
      pfam13091
      Location:149 → 285
      PLDc_2; PLD-like domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      119093956..119125620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5XK72.1 GenPept UniProtKB/Swiss-Prot:Q5XK72

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.