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    tcaf1.L TRPM8 channel associated factor 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 494989, updated on 4-Jan-2025

    Summary

    Official Symbol
    tcaf1.L
    Official Full Name
    TRPM8 channel associated factor 1 L homeolog
    Primary source
    Xenbase:XB-GENE-6078820
    Locus tag
    XELAEV_18017960mg
    See related
    EnsemblRapid:ENSXLAG00005034733 AllianceGenome:Xenbase:XB-GENE-6078820
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    tcaf; tcaf1; fam115; fam115a; fam139a
    Summary
    Orthologous to human TCAF1 (TRPM8 channel associated factor 1). [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

    See tcaf1.L in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (95673561..95686697)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (80357867..80371003)

    Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene golgin B1 L homeolog Neighboring gene guanylate cyclase activator 1A like L homeolog Neighboring gene TRPM8 channel-associated factor homolog Neighboring gene TRPM8 channel-associated factor homolog

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    TRPM8 channel-associated factor homolog
    Names
    Protein FAM139A
    TRPM8 channel-associated factor 1
    family with sequence similarity 115, member A
    protein FAM115

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001094696.1NP_001088165.1  TRPM8 channel-associated factor homolog

      See identical proteins and their annotated locations for NP_001088165.1

      Status: PROVISIONAL

      Source sequence(s)
      BC084073
      UniProtKB/Swiss-Prot
      Q5XHI4
      UniProtKB/TrEMBL
      A0A974DE77
      Related
      ENSXLAP00005103821.1, ENSXLAT00005105840.1
      Conserved Domains (1) summary
      pfam13402
      Location:520871
      Peptidase_M60; Peptidase M60, enhancin and enhancin-like

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      95673561..95686697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)