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    xni flap endonuclease Xni [ Yersinia pseudotuberculosis ]

    Gene ID: 49784967, updated on 15-Dec-2024

    Summary

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    Gene symbol
    xni
    Gene description
    flap endonuclease Xni
    Locus tag
    EL213_RS04830
    Gene type
    protein coding
    Organism
    Yersinia pseudotuberculosis (strain: NCTC10275, serovar: not available: to be reported later, nat-host: Bird (Turkey), culture-collection: NCTC:10275, type-material: type strain of Yersinia pseudotuberculosis)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
    Old locus tag
    NCTC10275_00934
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    Genomic context

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    Location:
    chromosome: 1

    1 - NZ_LR134373.1Genomic Context describing neighboring genes Neighboring gene transcriptional regulator GcvA Neighboring gene DUF423 domain-containing protein Neighboring gene 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM Neighboring gene nucleotide 5'-monophosphate nucleosidase PpnN Neighboring gene NADPH-dependent 7-cyano-7-deazaguanine reductase QueF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_LR134373.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Exonuclease IX of Escherichia coli. Shafritz KM, et al. Nucleic Acids Res, 1998 Jun 1. PMID 9592142, Free PMC Article
    2. Active site substitutions delineate distinct classes of eubacterial flap endonuclease. Allen LM, et al. Biochem J, 2009 Mar 1. PMID 19000038, Free PMC Article
    3. Molecular interactions of Escherichia coli ExoIX and identification of its associated 3'-5' exonuclease activity. Hodskinson MR, et al. Nucleic Acids Res, 2007. PMID 17567612, Free PMC Article
    4. Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica. Johnson SL, et al. Genome Announc, 2015 Apr 30. PMID 25931590, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    flap endonuclease Xni
    WP_011192868.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_LR134373.1 Reference assembly

      Range
      1111845..1112600 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011192868.1 MULTISPECIES: flap endonuclease Xni [Yersinia pseudotuberculosis complex]

      See identical proteins and their annotated locations for WP_011192868.1

      UniProtKB/Swiss-Prot
      A7FFF8, B1JQE9, B2JZ46, Q667H8
    Nucleotide Protein
    Heading Accession and Version