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    yihA ribosome biogenesis GTP-binding protein YihA/YsxC [ Staphylococcus epidermidis ]

    Gene ID: 50018537, updated on 3-Dec-2024

    Summary

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    Gene symbol
    yihA
    Gene description
    ribosome biogenesis GTP-binding protein YihA/YsxC
    Locus tag
    EQW00_RS05940
    Gene type
    protein coding
    Organism
    Staphylococcus epidermidis (strain: ATCC 14990, culture-collection: ATCC:14990, type-material: type strain of Staphylococcus epidermidis)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
    Old locus tag
    EQW00_05945
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    Genomic context

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    NZ_CP035288.1Genomic Context describing neighboring genes Neighboring gene trigger factor Neighboring gene ATP-dependent Clp protease ATP-binding subunit ClpX Neighboring gene glutamyl-tRNA reductase Neighboring gene cytochrome c biogenesis protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP035288.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Distinct clonal lineages and within-host diversification shape invasive Staphylococcus epidermidis populations. Both A, et al. PLoS Pathog, 2021 Feb. PMID 33544760, Free PMC Article
    2. Structure of an essential GTPase, YsxC, from Thermotoga maritima. Chan KH, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2011 Jun 1. PMID 21636901, Free PMC Article
    3. YsxC, an essential protein in Staphylococcus aureus crucial for ribosome assembly/stability. Cooper EL, et al. BMC Microbiol, 2009 Dec 18. PMID 20021644, Free PMC Article
    4. YihA GTPases localize to the apicoplast and mitochondrion of the malaria parasite and interact with LSU of organellar ribosomes. Gupta A, et al. Mol Biochem Parasitol, 2020 Mar. PMID 32057832
    5. Interactions of an essential Bacillus subtilis GTPase, YsxC, with ribosomes. Wicker-Planquart C, et al. J Bacteriol, 2008 Jan. PMID 17981968, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ribosome biogenesis GTP-binding protein YihA/YsxC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP035288.1 Reference assembly

      Range
      1201639..1202226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_001830838.1 MULTISPECIES: ribosome biogenesis GTP-binding protein YihA/YsxC [Staphylococcus]

      See identical proteins and their annotated locations for WP_001830838.1

      UniProtKB/Swiss-Prot
      Q5HNN0, Q8CS80
      UniProtKB/TrEMBL
      A0A2G7I0I7, A0A9Q5P175, A0AAV3D775
      Conserved Domains (1) summary
      PRK00454
      Location:13 → 195
      engB; GTP-binding protein YsxC; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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