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    OSTLU_27929 hypothetical protein [ Ostreococcus lucimarinus CCE9901 ]

    Gene ID: 5005778, updated on 21-Dec-2023

    Summary

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    Gene symbol
    OSTLU_27929
    Gene description
    hypothetical protein
    Locus tag
    OSTLU_27929
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Ostreococcus lucimarinus CCE9901 (strain: CCE9901)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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    Genomic context

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    See OSTLU_27929 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    1
    Sequence:
    Chromosome: 15; NC_009369.1 (444125..445667, complement)

    Chromosome 15 - NC_009369.1Genomic Context describing neighboring genes Neighboring gene MIT family transporter: magnesium ion Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene AAAP family transporter: amino acid

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009369.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Palenik B, et al. Proc Natl Acad Sci U S A, 2007 May 1. PMID 17460045, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II C-terminal domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009369.1 Reference assembly

      Range
      444125..445667 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001421763.1 → XP_001421800.1  predicted protein [Ostreococcus lucimarinus CCE9901]

      See identical proteins and their annotated locations for XP_001421800.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7R9T4L9, A4S8Q2
      Conserved Domains (1) summary
      pfam12237
      Location:187 → 333
      PCIF1_WW; Phosphorylated CTD interacting factor 1 WW domain
    Nucleotide Protein
    Heading Accession and Version

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