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    PBDC1 polysaccharide biosynthesis domain containing 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 511011, updated on 30-Jan-2025

    Summary

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    Official Symbol
    PBDC1provided by VGNC
    Official Full Name
    polysaccharide biosynthesis domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:32604
    See related
    BGD:BT17416; EnsemblRapid:ENSBTAG00070032776
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    CXHXorf26; C11HXORF26
    Orthologs
    human mouse all
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    Genomic context

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    See PBDC1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (75540557..75544917, complement)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene eukaryotic translation initiation factor 5B-like Neighboring gene endogenous retrovirus group K member 7 Gag polyprotein-like Neighboring gene MAGE family member E2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein PBDC1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      75540557..75544917 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002699986.6 → XP_002700032.1  protein PBDC1 isoform X1

      See identical proteins and their annotated locations for XP_002700032.1

      UniProtKB/TrEMBL
      F1MV85, Q1RMH0
      Related
      ENSBTAP00070045048.1, ENSBTAT00070073950.1
      Conserved Domains (1) summary
      pfam04669
      Location:35 → 159
      Polysacc_synt_4; Polysaccharide biosynthesis

    2. XM_005227979.5 → XP_005228036.1  protein PBDC1 isoform X2

      See identical proteins and their annotated locations for XP_005228036.1

      Conserved Domains (1) summary
      pfam04669
      Location:1 → 123
      Polysacc_synt_4; Polysaccharide biosynthesis
    Nucleotide Protein Strain
    Heading Accession and Version

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