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    rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [ Bacillus wiedmannii ]

    Gene ID: 51132087, updated on 3-Dec-2024

    Summary

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    Gene symbol
    rlmD
    Gene description
    23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
    Locus tag
    D4A37_RS02425
    Gene type
    protein coding
    Organism
    Bacillus wiedmannii (strain: SR52, nat-host: Alvinocaris longirostris)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group
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    Genomic context

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    NZ_CP032365.1Genomic Context describing neighboring genes Neighboring gene delta-lactam-biosynthetic de-N-acetylase Neighboring gene DNA-3-methyladenine glycosylase Neighboring gene tRNA pseudouridine(38-40) synthase TruA Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP032365.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the 23 S ribosomal RNA m5U1939 methyltransferase from Escherichia coli. Agarwalla S, et al. J Biol Chem, 2002 Mar 15. PMID 11779873

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
    WP_000615214.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP032365.1 Reference assembly

      Range
      466815..468194
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_000615214.1 MULTISPECIES: 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [Bacillus]

      See identical proteins and their annotated locations for WP_000615214.1

      UniProtKB/TrEMBL
      A0A0G8FAG1, A0A1A9PLL5, A0A1C3ZU17, A0A242Z6C5, A0A246PMJ5, A0A6H0TJR4, A0A7V7L717, A0AAT9PNW3, A0AAU8F4D1, C2P9X8, J9A432
      Conserved Domains (1) summary
      TIGR00479
      Location:23 → 451
      rumA; 23S rRNA (uracil-5-)-methyltransferase RumA
    Nucleotide Protein
    Heading Accession and Version