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    CBO_RS05615 MATE family efflux transporter [ Clostridium botulinum A str. ATCC 3502 ]

    Gene ID: 5185358, updated on 12-Apr-2023

    Summary

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    Gene symbol
    CBO_RS05615
    Gene description
    MATE family efflux transporter
    Locus tag
    CBO_RS05615
    Gene type
    protein coding
    Organism
    Clostridium botulinum A str. ATCC 3502 (strain: ATCC 3502)
    Lineage
    Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
    Old locus tag
    CBO1103
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    Genomic context

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    Sequence:
    NC_009495.1 (1214275..1215642)

    NC_009495.1Genomic Context describing neighboring genes Neighboring gene sodium:alanine symporter family protein Neighboring gene MarR family winged helix-turn-helix transcriptional regulator Neighboring gene hypothetical protein Neighboring gene DUF2971 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009495.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes. Sebaihia M, et al. Genome Res, 2007 Jul. PMID 17519437, Free PMC Article
    2. Structural basis for the blockade of MATE multidrug efflux pumps. Radchenko M, et al. Nat Commun, 2015 Aug 6. PMID 26246409, Free PMC Article
    3. Principles of Alternating Access in Multidrug and Toxin Extrusion (MATE) Transporters. Claxton DP, et al. J Mol Biol, 2021 Aug 6. PMID 33774036, Free PMC Article
    4. Structural biology of the multidrug and toxic compound extrusion superfamily transporters. Kusakizako T, et al. Biochim Biophys Acta Biomembr, 2020 Dec 1. PMID 31866287

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    MATE family efflux transporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009495.1 Reference assembly

      Range
      1214275..1215642
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011948764.1 MATE family efflux transporter [Clostridium botulinum]

      See identical proteins and their annotated locations for WP_011948764.1

      UniProtKB/TrEMBL
      A5I0U5, A7G2K7
      Conserved Domains (1) summary
      cd13143
      Location:11 → 438
      MATE_MepA_like; Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA
    Nucleotide Protein
    Heading Accession and Version