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    SNX3 sorting nexin 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 528265, updated on 27-Dec-2024

    Summary

    Official Symbol
    SNX3provided by VGNC
    Official Full Name
    sorting nexin 3provided by VGNC
    Primary source
    VGNC:VGNC:35107
    See related
    BGD:BT25454; Ensembl:ENSBTAG00000018801
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See SNX3 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (41870929..41918141)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene AFG1 like ATPase Neighboring gene ribosomal protein S4 X-linked pseudogene Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene nuclear receptor subfamily 2 group E member 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in endocytic recycling IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in late endosome to Golgi transport IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in early endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of retromer complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079778.1NP_001073246.1  sorting nexin-3

      See identical proteins and their annotated locations for NP_001073246.1

      Status: PROVISIONAL

      Source sequence(s)
      BC114888
      UniProtKB/Swiss-Prot
      Q1RMH8
      UniProtKB/TrEMBL
      A0AAA9THG4
      Related
      ENSBTAP00000025026.3, ENSBTAT00000025026.4
      Conserved Domains (1) summary
      cd07293
      Location:28150
      PX_SNX3; The phosphoinositide binding Phox Homology domain of Sorting Nexin 3

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      41870929..41918141
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059889737.1XP_059745720.1  sorting nexin-3 isoform X1