U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Trcg1 taste receptor cell gene 1 [ Mus musculus (house mouse) ]

    Gene ID: 541610, updated on 27-Nov-2024

    Summary

    Official Symbol
    Trcg1provided by MGI
    Official Full Name
    taste receptor cell gene 1provided by MGI
    Primary source
    MGI:MGI:3576664
    See related
    Ensembl:ENSMUSG00000070298 AllianceGenome:MGI:3576664
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Is expressed in circumvallate papillae; tongue epithelium; and uterus. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Trcg1 in Genome Data Viewer
    Location:
    9 B; 9 30.89 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (57143839..57157147)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (57236556..57249864)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700041C23 gene Neighboring gene STARR-seq mESC enhancer starr_24219 Neighboring gene STARR-seq mESC enhancer starr_24220 Neighboring gene STARR-positive B cell enhancer ABC_E11407 Neighboring gene predicted gene, 46115 Neighboring gene RIKEN cDNA 1700017B05 gene Neighboring gene STARR-positive B cell enhancer ABC_E890 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:57126080-57126189 Neighboring gene STARR-seq mESC enhancer starr_24223 Neighboring gene STARR-seq mESC enhancer starr_24225 Neighboring gene STARR-seq mESC enhancer starr_24226 Neighboring gene predicted gene, 39343 Neighboring gene STARR-seq mESC enhancer starr_24227 Neighboring gene NSA2 ribosome biogenesis homolog pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General protein information

    Preferred Names
    taste receptor cell protein 1
    Names
    taste receptor protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014398.2NP_001014420.2  taste receptor cell protein 1 precursor

      See identical proteins and their annotated locations for NP_001014420.2

      Status: VALIDATED

      Source sequence(s)
      AC151714, AY701870
      Consensus CDS
      CCDS23218.1
      UniProtKB/Swiss-Prot
      Q58Y73, Q58Y74
      UniProtKB/TrEMBL
      F8VPJ5
      Related
      ENSMUSP00000091357.4, ENSMUST00000093837.5
      Conserved Domains (1) summary
      PHA03247
      Location:101408
      PHA03247; large tegument protein UL36; Provisional

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      57143839..57157147
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)