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    IFM58399_07020 hypothetical protein [ Aspergillus lentulus ]

    Gene ID: 54319177, updated on 31-Oct-2024

    Summary

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    Gene symbol
    IFM58399_07020
    Gene description
    hypothetical protein
    Locus tag
    IFM58399_07020
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Aspergillus lentulus (strain: IFM 58399, culture-collection: IFM<JPN>:58399)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See IFM58399_07020 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_022983913.1Genomic Context describing neighboring genes Neighboring gene NAD/NADP-dependent indole-3-acetaldehyde reductase Neighboring gene hypothetical protein Neighboring gene secretion related GTPase SrgD Neighboring gene dolichyl-phosphate-mannose--protein mannosyltransferase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022983913.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_022983913.1 Reference assembly

      Range
      197367..199511 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033561415.1 → XP_033417306.1  uncharacterized protein IFM58399_07020 [Aspergillus lentulus]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAN5YLV6
      Conserved Domains (1) summary
      pfam04515
      Location:349 → 673
      Choline_transpo; Plasma-membrane choline transporter
    Nucleotide Protein
    Heading Accession and Version