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    Gm5941 predicted gene 5941 [ Mus musculus (house mouse) ]

    Gene ID: 546347, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm5941provided by MGI
    Official Full Name
    predicted gene 5941provided by MGI
    Primary source
    MGI:MGI:3646197
    See related
    Ensembl:ENSMUSG00000071726 AllianceGenome:MGI:3646197
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG546347
    Expression
    Restricted expression toward testis adult (RPKM 67.2) See more
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    Genomic context

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    See Gm5941 in Genome Data Viewer
    Location:
    X C3; X 40.75 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (91533555..91534287)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (92489949..92490681)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene melanoma antigen, family B, 5 pseudogene Neighboring gene melanoma antigen, family B, 2 pseudogene Neighboring gene MAGE family member B18 Neighboring gene STARR-seq mESC enhancer starr_47541 Neighboring gene STARR-seq mESC enhancer starr_47542 Neighboring gene shugoshin 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47543 Neighboring gene predicted gene, 57676

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Clone Names

    • MGC118250

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_165047.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL626782
      Related
      ENSMUST00000096371.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      91533555..91534287
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001034103.1: Suppressed sequence

      Description
      NM_001034103.1: This RefSeq was removed because it is now thought that this gene does not encode a protein.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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