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    TVAGG3_0271410 STKc AMPK-like domain-containing protein [ Trichomonas vaginalis G3 ]

    Gene ID: 5465482, updated on 17-May-2024

    Summary

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    Gene symbol
    TVAGG3_0271410
    Gene description
    STKc AMPK-like domain-containing protein
    Locus tag
    TVAGG3_0271410
    See related
    TrichDB:TVAGG3_0271410; VEuPathDB:TVAGG3_0271410
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
    Lineage
    Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
    Old locus tag
    TVAG_2v0271410
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    Genomic context

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    See TVAGG3_0271410 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_067207.1 (3300966..3302674, complement)

    Chromosome V - NC_067207.1Genomic Context describing neighboring genes Neighboring gene Chain L Uncharacterized rRNA-Binding Protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067207.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    STKc AMPK-like domain-containing protein
    XP_001580925.1
    • Deepfry function prediction from predicted structure:drug binding protein;transferase activity;eggNOG seed ortholog:5722.XP_001580925.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_067207.1 Reference assembly

      Range
      3300966..3302674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001580875.1 → XP_001580925.1  STKc AMPK-like domain-containing protein [Trichomonas vaginalis G3]

      See identical proteins and their annotated locations for XP_001580925.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A2DHV0
      Conserved Domains (2) summary
      smart00220
      Location:19 → 271
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14003
      Location:18 → 270
      STKc_AMPK-like; Catalytic domain of AMP-activated protein kinase-like Serine/Threonine Kinases
    Nucleotide Protein
    Heading Accession and Version

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