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    LOC5505450 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 [ Nematostella vectensis (starlet sea anemone) ]

    Gene ID: 5505450, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC5505450
    Gene description
    arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2
    Locus tag
    NEMVEDRAFT_v1g127054
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nematostella vectensis
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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    Genomic context

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    See LOC5505450 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    101 current jaNemVect1.1 (GCF_932526225.1) 11 NC_064044.1 (5368631..5392516)
    100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834180.1 (133928..161590)

    Chromosome 11 - NC_064044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116613222 Neighboring gene uncharacterized LOC125573600 Neighboring gene skeletal aspartic acid-rich protein 2 Neighboring gene uncharacterized LOC125573863 Neighboring gene uncharacterized LOC125573855 Neighboring gene uncharacterized LOC116613216

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2
    Names
    predicted protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference jaNemVect1.1

    Genomic

    1. NC_064044.1 Reference jaNemVect1.1

      Range
      5368631..5392516
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_048734668.1 → XP_048590625.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2

      UniProtKB/TrEMBL
      A7SQ28
    Nucleotide Protein
    Heading Accession and Version

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