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    HER10_EVM0013304 TPR domain-containing protein [ Colletotrichum scovillei ]

    Gene ID: 55987356, updated on 30-Nov-2023

    Summary

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    Gene symbol
    HER10_EVM0013304
    Gene description
    TPR domain-containing protein
    Locus tag
    HER10_EVM0013304
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Colletotrichum scovillei (strain: TJNH1, nat-host: Capsicum annuum)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum acutatum species complex
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    Genomic context

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    See HER10_EVM0013304 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_023336273.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023336273.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome Sequence Resource for Colletotrichum scovillei, the Cause of Anthracnose Disease of Chili. Huo J, et al. Mol Plant Microbe Interact, 2021 Jan. PMID 33006530
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TPR domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_023336273.1 Reference assembly

      Range
      239518..240243
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035482666.1 → XP_035325766.1  TPR domain-containing protein [Colletotrichum scovillei]

      Status: PROVISIONAL

      Conserved Domains (1) summary
      pfam13358
      Location:58 → 193
      DDE_3; DDE superfamily endonuclease
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases