U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LMJF_33_1690 putative DNA polymerase delta catalytic subunit [ Leishmania major strain Friedlin ]

    Gene ID: 5654592, updated on 30-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LMJF_33_1690
    Gene description
    putative DNA polymerase delta catalytic subunit
    Locus tag
    LMJF_33_1690
    Gene type
    protein coding
    RNA name
    putative DNA polymerase delta catalytic subunit
    RefSeq status
    PROVISIONAL
    Organism
    Leishmania major strain Friedlin (strain: Friedlin)
    Lineage
    Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LMJF_33_1690 in Genome Data Viewer
    Location:
    chromosome: 33
    Exon count:
    1
    Sequence:
    Chromosome: 33; NC_007285.2 (783092..786190)

    Chromosome 33 - NC_007285.2Genomic Context describing neighboring genes Neighboring gene UDP-GlcNAc:PI a1-6 GlcNAc-transferase Neighboring gene thiamine biosynthesis-like protein Neighboring gene putative DNA-dependent ATPase Neighboring gene putative protein kinase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_007285.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
    2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5'-DNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-directed DNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication proofreading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA-templated DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in base-excision repair, gap-filling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleotide-excision repair, DNA gap filling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of delta DNA polymerase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Names
    putative DNA polymerase delta catalytic subunit
    XP_001685930.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007285.2 Reference assembly

      Range
      783092..786190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001685878.1 → XP_001685930.1  putative DNA polymerase delta catalytic subunit [Leishmania major strain Friedlin]

      See identical proteins and their annotated locations for XP_001685930.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q4Q418
      Conserved Domains (1) summary
      PTZ00166
      Location:1 → 1032
      PTZ00166; DNA polymerase delta catalytic subunit; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials