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    ybgE cyd operon protein YbgE [ Pectobacterium atrosepticum ]

    Gene ID: 57208181, updated on 30-Mar-2024

    Summary

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    Gene symbol
    ybgE
    Gene description
    cyd operon protein YbgE
    Locus tag
    GZ59_RS06755
    Gene type
    protein coding
    Organism
    Pectobacterium atrosepticum (strain: 21A, nat-host: Solanum tuberosum)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
    Old locus tag
    GZ59_14000
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    Genomic context

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    NZ_CP009125.1Genomic Context describing neighboring genes Neighboring gene cytochrome ubiquinol oxidase subunit I Neighboring gene cytochrome d ubiquinol oxidase subunit II Neighboring gene cytochrome bd-I oxidase subunit CydX Neighboring gene tol-pal system-associated acyl-CoA thioesterase Neighboring gene Tol-Pal system protein TolQ Neighboring gene colicin uptake protein TolR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP009125.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SigmoID: a user-friendly tool for improving bacterial genome annotation through analysis of transcription control signals. Nikolaichik Y, et al. PeerJ, 2016. PMID 27257541, Free PMC Article
    2. Genome Sequence of Pectobacterium atrosepticum Strain 21A. Nikolaichik Y, et al. Genome Announc, 2014 Sep 18. PMID 25237028, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    cyd operon protein YbgE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP009125.1 Reference assembly

      Range
      1531642..1531935
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011092953.1 cyd operon protein YbgE [Pectobacterium atrosepticum]

      See identical proteins and their annotated locations for WP_011092953.1

      UniProtKB/TrEMBL
      Q6D7F7
      Conserved Domains (1) summary
      PRK10588
      Location:1 → 96
      PRK10588; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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