U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PotMrB4_RS13540 efflux RND transporter permease subunit [ Metapseudomonas otitidis ]

    Gene ID: 57397916, updated on 24-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PotMrB4_RS13540
    Gene description
    efflux RND transporter permease subunit
    Locus tag
    PotMrB4_RS13540
    Gene type
    protein coding
    Organism
    Metapseudomonas otitidis (strain: MrB4)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Metapseudomonas
    Old locus tag
    PtoMrB4_26990
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_AP022642.1Genomic Context describing neighboring genes Neighboring gene TonB-dependent receptor Neighboring gene MFS transporter Neighboring gene efflux transporter outer membrane subunit Neighboring gene multidrug efflux RND transporter periplasmic adaptor subunit MexE Neighboring gene type II secretion system protein GspM

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_AP022642.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Mechanisms of RND multidrug efflux pumps. Nikaido H, et al. Biochim Biophys Acta, 2009 May. PMID 19026770, Free PMC Article
    2. Complete Genome Sequence of Pseudomonas otitidis Strain MrB4, Isolated from Lake Biwa in Japan. Miyazaki K, et al. Microbiol Resour Announc, 2020 Apr 16. PMID 32299875, Free PMC Article
    3. The RND permease superfamily: an ancient, ubiquitous and diverse family that includes human disease and development proteins. Tseng TT, et al. J Mol Microbiol Biotechnol, 1999 Aug. PMID 10941792

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    efflux RND transporter permease subunit

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP022642.1 Reference assembly

      Range
      2960745..2963933 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_074971454.1 MULTISPECIES: efflux RND transporter permease subunit [Pseudomonadaceae]

      UniProtKB/TrEMBL
      A0A1I0UH24
      Conserved Domains (1) summary
      pfam00873
      Location:3 → 1040
      ACR_tran; AcrB/AcrD/AcrF family
    Nucleotide Protein
    Heading Accession and Version