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    traF type-F conjugative transfer system pilin assembly protein TraF [ Raoultella planticola ]

    Gene ID: 57431642, updated on 10-Dec-2024

    Summary

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    Gene symbol
    traF
    Gene description
    type-F conjugative transfer system pilin assembly protein TraF
    Locus tag
    MC50_RS26990
    Gene type
    protein coding
    Organism
    Raoultella planticola (strain: FDAARGOS_64, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_64)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Raoultella
    Old locus tag
    MC50_026990
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    Genomic context

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    Location:
    plasmid: unnamed1

    NZ_CP026048.1Genomic Context describing neighboring genes Neighboring gene conjugal transfer pilus assembly protein TraH Neighboring gene F-type conjugal transfer protein TrbF Neighboring gene type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB Neighboring gene type-F conjugative transfer system pilin chaperone TraQ Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene conjugal transfer protein TrbE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP026048.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. F-like type IV secretion systems encode proteins with thioredoxin folds that are putative DsbC homologues. Elton TC, et al. J Bacteriol, 2005 Dec. PMID 16321931, Free PMC Article
    2. The product of the F plasmid transfer operon gene, traF, is a periplasmic protein. Wu JH, et al. J Bacteriol, 1988 Aug. PMID 3042757, Free PMC Article
    3. Mobile genetic elements: the agents of open source evolution. Frost LS, et al. Nat Rev Microbiol, 2005 Sep. PMID 16138100

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type-F conjugative transfer system pilin assembly protein TraF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP026048.1 Reference assembly

      Range
      93604..94356 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004152677.1 MULTISPECIES: type-F conjugative transfer system pilin assembly protein TraF [Gammaproteobacteria]

      See identical proteins and their annotated locations for WP_004152677.1

      UniProtKB/TrEMBL
      A0A0H3H1D1, A0A0S1TLQ8, A0A2J5A287, A0A2S1FVE5, A0A2V3KF70, A0A387K0D1, A0A5D4LS11, A0A6C0NGA5, A0A8D5XI22, A0A9Q9CJW6, A0AAQ1QU97, A6TII2, D4HQL7, X2JMR6
    Nucleotide Protein
    Heading Accession and Version