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    tssC type VI secretion system contractile sheath large subunit [ Yersinia pestis A1122 ]

    Gene ID: 57975015, updated on 3-Dec-2024

    Summary

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    Gene symbol
    tssC
    Gene description
    type VI secretion system contractile sheath large subunit
    Locus tag
    A1122_RS07430
    Gene type
    protein coding
    Organism
    Yersinia pestis A1122 (strain: A1122)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
    Old locus tag
    A1122_07340
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    Genomic context

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    Sequence:
    NC_017168.1 (1620694..1622175)

    NC_017168.1Genomic Context describing neighboring genes Neighboring gene Hcp family type VI secretion system effector Neighboring gene type VI secretion system contractile sheath small subunit Neighboring gene type VI secretion system baseplate subunit TssE Neighboring gene type VI secretion system baseplate subunit TssF Neighboring gene IS3-like element IS1661 family transposase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_017168.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Use of proteomics to identify novel virulence determinants that are required for Edwardsiella tarda pathogenesis. Rao PS, et al. Mol Microbiol, 2004 Jul. PMID 15228535
    2. Dissection of the TssB-TssC interface during type VI secretion sheath complex formation. Zhang XY, et al. PLoS One, 2013. PMID 24282569, Free PMC Article
    3. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Mougous JD, et al. Science, 2006 Jun 9. PMID 16763151, Free PMC Article
    4. Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica. Johnson SL, et al. Genome Announc, 2015 Apr 30. PMID 25931590, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    type VI secretion system contractile sheath large subunit

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_017168.1 Reference assembly

      Range
      1620694..1622175
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002212099.1 type VI secretion system contractile sheath large subunit [Yersinia pestis]

      See identical proteins and their annotated locations for WP_002212099.1

      UniProtKB/TrEMBL
      A0A0E1NMQ7, A0A0H2YD26, A0A3N4AW62, A0A9X3BLZ7, A0AAP9G424, A0AAV3BAQ7, A0AAX2HXG1, Q0WAV1, Q7CLD3
      Conserved Domains (1) summary
      COG3517
      Location:3 → 493
      COG3517; Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport]
    Nucleotide Protein
    Heading Accession and Version

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