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    AL499_RS02460 ribonuclease J [ Staphylococcus lugdunensis ]

    Gene ID: 58089907, updated on 3-Mar-2024

    Summary

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    Gene symbol
    AL499_RS02460
    Gene description
    ribonuclease J
    Locus tag
    AL499_RS02460
    Gene type
    protein coding
    Organism
    Staphylococcus lugdunensis (strain: FDAARGOS_141, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_141)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
    Old locus tag
    AL499_02460
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    Genomic context

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    NZ_CP014022.1Genomic Context describing neighboring genes Neighboring gene GntR family transcriptional regulator Neighboring gene DNA translocase FtsK Neighboring gene polyribonucleotide nucleotidyltransferase Neighboring gene 30S ribosomal protein S15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP014022.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human commensals producing a novel antibiotic impair pathogen colonization. Zipperer A, et al. Nature, 2016 Jul 28. PMID 27466123
    2. An evolutionary classification of the metallo-beta-lactamase fold proteins. Aravind L. In Silico Biol, 1999. PMID 11471246
    3. Metallo-beta-lactamases (classification, activity, genetic organization, structure, zinc coordination) and their superfamily. Bebrone C. Biochem Pharmacol, 2007 Dec 15. PMID 17597585

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    ribonuclease J
    WP_002459269.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP014022.1 Reference assembly

      Range
      509161..510834 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002459269.1 MULTISPECIES: ribonuclease J [Staphylococcus]

      See identical proteins and their annotated locations for WP_002459269.1

      UniProtKB/TrEMBL
      A0A292DET3, A0A853UZW2
      Conserved Domains (1) summary
      COG0595
      Location:4 → 554
      RnjA; mRNA degradation ribonuclease J1/J2 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version