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    AL499_RS11415 LytTR family DNA-binding domain-containing protein [ Staphylococcus lugdunensis ]

    Gene ID: 58091670, updated on 3-Mar-2024

    Summary

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    Gene symbol
    AL499_RS11415
    Gene description
    LytTR family DNA-binding domain-containing protein
    Locus tag
    AL499_RS11415
    Gene type
    protein coding
    Organism
    Staphylococcus lugdunensis (strain: FDAARGOS_141, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_141)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
    Old locus tag
    AL499_11420
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    Genomic context

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    NZ_CP014022.1Genomic Context describing neighboring genes Neighboring gene sucrose-6-phosphate hydrolase Neighboring gene carbohydrate kinase Neighboring gene GHKL domain-containing protein Neighboring gene cyclic lactone autoinducer peptide

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP014022.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Whole-Genome Sequencing of Seven Strains of Staphylococcus lugdunensis Allows Identification of Mobile Genetic Elements. Argemi X, et al. Genome Biol Evol, 2017 May 1. PMID 28444231, Free PMC Article
    2. A novel type of conserved DNA-binding domain in the transcriptional regulators of the AlgR/AgrA/LytR family. Nikolskaya AN, et al. Nucleic Acids Res, 2002 Jun 1. PMID 12034833, Free PMC Article
    3. Structural classification of bacterial response regulators: diversity of output domains and domain combinations. Galperin MY. J Bacteriol, 2006 Jun. PMID 16740923, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LytTR family DNA-binding domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP014022.1 Reference assembly

      Range
      2438897..2439613 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002461418.1 MULTISPECIES: LytTR family DNA-binding domain-containing protein [Staphylococcus]

      See identical proteins and their annotated locations for WP_002461418.1

      UniProtKB/TrEMBL
      A0A133Q472, A0A853V598
      Conserved Domains (1) summary
      COG3279
      Location:1 → 238
      LytT; DNA-binding response regulator, LytR/AlgR family [Transcription, Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version